Analysis results of the paper baseLess: Lightweight detection of sequences in raw MinION data

DOI:10.4121/20261392.v2
The DOI displayed above is for this specific version of this dataset, which is currently the latest. Newer versions may be published in the future. For a link that will always point to the latest version, please use
DOI: 10.4121/20261392
Datacite citation style:
Ben Noordijk; Reindert Nijland; Victor J. Carrion; Jos M. Raaijmakers; Dick de Ridder et. al. (2022): Analysis results of the paper baseLess: Lightweight detection of sequences in raw MinION data. Version 2. 4TU.ResearchData. dataset. https://doi.org/10.4121/20261392.v2
Other citation styles (APA, Harvard, MLA, Vancouver, Chicago, IEEE) available at Datacite

Dataset

choose version:
version 2 - 2022-07-21 (latest)
version 1 - 2022-07-18

BaseLess reduces your MinION sequencing device to a simple species  detector. As a trade-off, it runs on inexpensive computational hardware  like single-board computers. The baseLess code base can be found here. All data and analysis results described in the paper describing baseLess are stored in this file.

History

  • 2022-07-18 first online
  • 2022-07-21 published, posted

Publisher

4TU.ResearchData

Format

fast5 Oxford Nanopore Technologies read files, snakemake pipeline scripts, svg image files, csv files

Funding

  • Vrije Programma of the Foundation for Fundamental Research on Matter under grant number 16SMPS05

Organizations

Bioinformatics Group, Wageningen University & Research

Department of Bionanoscience, Delft University of Technology

DATA

Files (2)