Hu, Yimin; Schwab, Samuel; Deiss, Silvia; Escudeiro, Pedro; Joiner, Joe et. al. (2023): Data underlying the publication: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending. Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/6c07e4bb-96f1-4ee0-88ef-6978bda27e5d.v1

Dataset

x choose version: version 2 - 2024-04-10 (latest)

• Physical Chemistry (incl. Structural)
• Microbiology
• Biochemistry and Cell Biology
• Biological Sciences
• Chemical Sciences

Bacterial chromatin, Bdellovibrio bacteriovorus, DNA bending, HBb, Histones, Nucleoid associated proteins

CC BY 4.0

RefWorks, BibTeX, Reference Manager, Endnote, DataCite, NLM, DC, CFF

by Yimin Hu, Samuel Schwab, Silvia Deiss, Pedro Escudeiro, Joe Joiner, Marcus D. Hartmann, Andrei N. Lupas, Birte Hernandez Alvarez, Vikram Alva, Remus T. Dame

The research objective was to study how histone HBb from Bdellovibrio bacteriovorus bind and structures DNA. We have studied this with electrophoretic mobility shift assays, micrococcal nuclease assays, DNA topology assays, ligase-mediated circularisation, DAP-seq, tethered particle motion (TPM) and molecular dynamics (MD) simulations. This dataset contains the raw data of obtained root mean squared displacement (TPM) and the parameter and trajectory files of the simulations (MD).

• 2023-11-07 first online, published, posted

4TU.ResearchData

.xlsx, .zip, and related README .text files

Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending

• https://doi.org/10.1101/2023.02.26.530074

Department of Protein Evolution, Max Planck Institute for Biology Tübingen;
Interfaculty Institute of Biochemistry, University of Tübingen;
Leiden Institute of Chemistry, Leiden University