Kim, Eunsuk; Yoon, Hyunjin (2024): Data underlying the publication: LeuO fine-tunes the virulence attributable to Salmonella pathogenicity island-2 via repressing ssrA transcription in Salmonella Typhimurium. Version 2. 4TU.ResearchData. dataset. https://doi.org/10.4121/64f54597-1fa9-4817-874a-9c4a7bca5e32.v2

Dataset

x choose version: version 3 - 2024-11-11 (latest) version 1 - 2024-10-28

• Microbiology
• Biological Sciences

LeuO, malignancy, Pathogenicity, Salmonella Typhimurium, ssrA

CC BY 4.0

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by Eunsuk Kim , Hyunjin Yoon

These datasets provide the raw data used in the manuscript titled "LeuO Fine-Tunes Virulence Attributable to Salmonella Pathogenicity Island-2 by Repressing ssrA Transcription in Salmonella Typhimurium."

 

The datasets include the following:

 

(1) ChIP-Seq files: Paired-end reads files (format: fastq.gz).

(2) Processed ChIP-Seq data: Includes MACS2 output files and sequences used for LeuO motif generation (formats: narrowPeak, fasta).

(3) Numerical raw data: Used to produce all graphs in the manuscript (formats: xlsx).

*Note

A) High-throughput data have been deposited in the NCBI GEO database under accession number GSE280231 and will be available on the publication date.

B) All datasets presented will only be provided upon request from the original provider.

• 2024-10-28 first online

• 2024-11-08 published, posted

4TU.ResearchData

fastq/fasta/narrowPeak/xlsx/tif

• https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280231

• Bio & Medical Technology Development Program (grant code 2021M3A9I4026029) Ministry of Science and ICT (MSIT), National Research Foundation of Korea (NRF)
• Basic Science Research Program (grant code 2021R1F1A1058498) Ministry of Science and ICT (MSIT), National Research Foundation of Korea (NRF)

Ajou University, Department of Molecular Science and Technology;
Ajou University, Advanced College of Bio-convergence Engineering