The doi above is for this specific version of this dataset, which is currently the latest. Newer versions may be published in the future. For a link that will always point to the latest version, please use
doi: 10.4121/5f87d042-ccb3-4a23-b492-254d2ae2b406

Pillay, Stephanie; Zade, Ramin Shirali Hossein; van Lent, Paul; Thomas Abeel (2024): Data for publication: Metagenomic analysis of antibiotic resistance across the wastewater process. Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/5f87d042-ccb3-4a23-b492-254d2ae2b406.v1

Dataset

• Microbiology
• Other Information and Computing Sciences
• Information and Computing Sciences
• Biological Sciences

activated sludge, downstream, effluent, influent, metagenome, upstream, wastewater, wastewater treatment plant, whole genome

CC0

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by Stephanie Pillay , Ramin Shirali Hossein Zade , Paul van Lent , Thomas Abeel

The repository contains data used in the study: Metagenomic analysis of antibiotic resistance across the wastewater process. Publicly available metagenomic data was used in this study to represent the wastewater treatment plant process. Data was used according to descriptions by the previous studies that generated the data. This was labelled as Upstream, Influent, Effluent, Activated sludge, Effluent and Downstream. Data was used to analyse the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.

• 2024-12-09 first online, published, posted

4TU.ResearchData

Metagenomic analysis of antibiotic resistance across the wastewater process

• https://www.ncbi.nlm.nih.gov/sra

• National Research Foundation of South Africa (grant code 120192) National Research Foundation of South Africa

TU Delft, Faculty of Electrical Engineering, Mathematics and Computer Science, The Delft Bioinformatics Lab