Data underlying the publication: "The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool"

DOI:10.4121/14061122.v2
The DOI displayed above is for this specific version of this dataset, which is currently the latest. Newer versions may be published in the future. For a link that will always point to the latest version, please use
DOI: 10.4121/14061122

Datacite citation style

Eef Jonkheer; Sandra Smit; Theo van der Lee; Balázs Brankovics; Jan van der Wolf et. al. (2021): Data underlying the publication: "The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool". Version 2. 4TU.ResearchData. dataset. https://doi.org/10.4121/14061122.v2
Other citation styles (APA, Harvard, MLA, Vancouver, Chicago, IEEE) available at Datacite

Dataset

Version 2 - 2021-02-25 (latest)
Version 1 - 2021-02-23
The dataset contains 197 genome (.fna) and 197 annotation (.gff) files that are placed in the compressed 'pectobacterium_genomes.zip' and 'pectobacterium_annotations.zip' directories. An overview of the data, including strain names, NCBI accessions, and Biosample identifiers is added as 'genome_annotation_data.xlsx'

History

  • 2021-02-23 first online
  • 2021-02-25 published, posted

Publisher

4TU.ResearchData

Funding

  • This research was funded by the Dutch Ministry of Economic Affairs in the Topsector Program “Horticulture and Starting Materials” under the theme “Plant Health” (project number: TU 16022) and its partners (NAK, Naktuinbouw and BKD).

Organizations

Bioinformatics Group, Wageningen University & Research
Wageningen Plant Research, Wageningen University & Research
Nederlandse Algemene Keuringsdienst voor zaaizaad en pootgoed van landbouwgewassen

DATA

Files (4)