2024-01-10 11:54:17,711 Running colabfold 1.5.2 (b83abd29d5ce713c5c409ee67d99c043426aa6ab)
2024-01-10 11:54:27,723 Running on GPU
2024-01-10 11:54:28,845 Found 4 citations for tools or databases
2024-01-10 11:54:28,846 Query 1/1: P39394_tetramer (length 452)
2024-01-10 11:54:32,208 Setting max_seq=508, max_extra_seq=1540
2024-01-10 11:56:01,804 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.4 pTM=0.443 ipTM=0.397
2024-01-10 11:56:57,614 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55 pTM=0.336 ipTM=0.257 tol=5.09
2024-01-10 11:57:53,344 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71 pTM=0.564 ipTM=0.547 tol=18.8
2024-01-10 11:58:48,429 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.8 pTM=0.598 ipTM=0.588 tol=1.39
2024-01-10 11:59:43,333 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.4 pTM=0.61 ipTM=0.603 tol=0.862
2024-01-10 12:00:38,227 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.4 pTM=0.607 ipTM=0.6 tol=0.546
2024-01-10 12:01:33,202 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.3 pTM=0.617 ipTM=0.61 tol=0.409
2024-01-10 12:01:33,204 alphafold2_multimer_v3_model_1_seed_000 took 415.6s (6 recycles)
2024-01-10 12:02:28,450 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.4 pTM=0.545 ipTM=0.516
2024-01-10 12:03:23,387 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.2 pTM=0.629 ipTM=0.617 tol=2.35
2024-01-10 12:04:18,477 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73 pTM=0.638 ipTM=0.63 tol=1.8
2024-01-10 12:05:13,588 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.3 pTM=0.651 ipTM=0.644 tol=1.75
2024-01-10 12:06:08,806 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74 pTM=0.649 ipTM=0.643 tol=1.34
2024-01-10 12:07:04,040 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.5 pTM=0.654 ipTM=0.647 tol=0.735
2024-01-10 12:07:59,408 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.4 pTM=0.649 ipTM=0.642 tol=0.61
2024-01-10 12:07:59,410 alphafold2_multimer_v3_model_2_seed_000 took 385.9s (6 recycles)
2024-01-10 12:08:55,078 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=39.7 pTM=0.237 ipTM=0.153
2024-01-10 12:09:50,494 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.1 pTM=0.596 ipTM=0.579 tol=12.4
2024-01-10 12:10:45,930 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.6 pTM=0.605 ipTM=0.594 tol=1.9
2024-01-10 12:11:41,331 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.7 pTM=0.62 ipTM=0.611 tol=1.24
2024-01-10 12:12:36,804 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.6 pTM=0.614 ipTM=0.605 tol=0.866
2024-01-10 12:13:32,347 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.1 pTM=0.621 ipTM=0.612 tol=0.871
2024-01-10 12:14:27,865 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.9 pTM=0.616 ipTM=0.608 tol=0.944
2024-01-10 12:14:27,867 alphafold2_multimer_v3_model_3_seed_000 took 388.2s (6 recycles)
2024-01-10 12:15:23,683 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54 pTM=0.322 ipTM=0.254
2024-01-10 12:16:19,223 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.4 pTM=0.45 ipTM=0.405 tol=18.9
2024-01-10 12:17:14,792 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.4 pTM=0.603 ipTM=0.596 tol=2.15
2024-01-10 12:18:10,368 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.9 pTM=0.612 ipTM=0.606 tol=0.678
2024-01-10 12:19:05,972 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.6 pTM=0.607 ipTM=0.602 tol=0.66
2024-01-10 12:20:01,560 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.9 pTM=0.611 ipTM=0.605 tol=0.517
2024-01-10 12:20:57,175 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.1 pTM=0.612 ipTM=0.606 tol=0.458
2024-01-10 12:20:57,176 alphafold2_multimer_v3_model_4_seed_000 took 389.0s (6 recycles)
2024-01-10 12:21:53,060 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.2 pTM=0.429 ipTM=0.385
2024-01-10 12:22:48,636 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.3 pTM=0.307 ipTM=0.227 tol=13.8
2024-01-10 12:23:44,211 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.9 pTM=0.613 ipTM=0.604 tol=8.28
2024-01-10 12:24:39,707 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.1 pTM=0.614 ipTM=0.604 tol=0.815
2024-01-10 12:25:35,077 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.9 pTM=0.623 ipTM=0.614 tol=0.58
2024-01-10 12:26:30,383 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.2 pTM=0.629 ipTM=0.621 tol=0.71
2024-01-10 12:27:25,642 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.3 pTM=0.633 ipTM=0.625 tol=2.24
2024-01-10 12:27:25,644 alphafold2_multimer_v3_model_5_seed_000 took 388.2s (6 recycles)
2024-01-10 12:27:25,933 reranking models by 'multimer' metric
2024-01-10 12:27:25,933 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.4 pTM=0.649 ipTM=0.642
2024-01-10 12:27:25,935 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.3 pTM=0.633 ipTM=0.625
2024-01-10 12:27:25,936 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.3 pTM=0.617 ipTM=0.61
2024-01-10 12:27:25,938 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.9 pTM=0.616 ipTM=0.608
2024-01-10 12:27:25,939 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.1 pTM=0.612 ipTM=0.606
2024-01-10 12:27:29,477 Done
