cff-version: 1.2.0
abstract: "<p>Data set to reconstruct the Pectobacterium brasiliense pangenome described in van der Lee, et al. (2023) "An efficient triplex&nbsp;TaqMan&nbsp;quantitative PCR to detect a blackleg-causing lineage of&nbsp;<em>Pectobacterium brasiliense</em>&nbsp;in potato based on a pangenome analysis".<strong> </strong>The data set contains the input data (genomes, annotations, functions, phenotypes) to reconstruct the pangenome, the conda yml file to set up the environment to perform the pangenome analysis, and the data needed to create a BLAST database from all data in the pangenome.</p>"
authors:
  - family-names: van der Lee
    given-names: Theo
    orcid: "https://orcid.org/0000-0002-4756-8301"
  - family-names: Jonkheer
    given-names: Eef
    orcid: "https://orcid.org/0000-0002-2608-6311"
  - family-names: Smit
    given-names: Sandra
    orcid: "https://orcid.org/0000-0001-5239-5321"
  - family-names: van Gent-Pelzer
    given-names: Marga P.E.
    orcid: "https://orcid.org/0000-0002-1880-4344"
  - family-names: Brankovics
    given-names: Balázs
    orcid: "https://orcid.org/0000-0003-0536-7787"
title: "Data underlying the publication &#34;An Efficient Triplex TaqMan Quantitative PCR to Detect a Blackleg-Causing Lineage of Pectobacterium brasiliense in Potato Based on a Pangenome Analysis”"
keywords:
version: 1
identifiers:
  - type: doi
    value: 10.4121/fb37e29c-b94b-4888-b3c8-db889bf211e2.v1
license: CC0
date-released: 2023-08-28