cff-version: 1.2.0 abstract: "Supplementary data for the manuscript titled "Model-based wavefront shaping microscopy": We have developed a new class of model-based wavefront shaping method for imaging through diffuse media. We have demonstrated the feasibility and robustness of our technique by imaging fluorescent beads through a single light diffusing layer of PDMS. Here we add the data acquired during three experiments. In the first experiment, we used conventional two-photon microscopy to image beads. In the second, we used state-of-the-art feedback-based wavefront shaping and in the third, we used model-based wavefront shaping. We have included all raw image data (tiff format), processed images (matlab file format), used for making the figures in the manuscript. We also include the intensity image of the surface of the diffuser and reconstructed refractive index distribution for our study." authors: - family-names: Thendiyammal given-names: Abhilash orcid: "https://orcid.org/0000-0003-4074-3127" - family-names: Vellekoop given-names: I.M. (Ivo) orcid: "https://orcid.org/0000-0002-9674-7592" - family-names: Osnabrugge given-names: G. (Gerwin) - family-names: Knop given-names: T. (Tom) title: "Supplementary Data: Model-based wavefront shaping microscopy" keywords: version: 1 identifiers: - type: doi value: 10.4121/uuid:06083749-0577-49d1-b1a5-8ce38f50465a license: CC0 date-released: 2020-03-31