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Data underlying the publication: "The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool"

dataset
posted on 25.02.2021, 13:43 by Eef Jonkheer, Sandra Smit, Theo van der Lee, Balázs Brankovics, Jan van der Wolf, Robert Vreeburg
The dataset contains 197 genome (.fna) and 197 annotation (.gff) files that are placed in the compressed 'pectobacterium_genomes.zip' and 'pectobacterium_annotations.zip' directories. An overview of the data, including strain names, NCBI accessions, and Biosample identifiers is added as 'genome_annotation_data.xlsx'

Funding

This research was funded by the Dutch Ministry of Economic Affairs in the Topsector Program “Horticulture and Starting Materials” under the theme “Plant Health” (project number: TU 16022) and its partners (NAK, Naktuinbouw and BKD).

History

Publisher

4TU.ResearchData

Organizations

Bioinformatics Group, Wageningen University & Research Wageningen Plant Research, Wageningen University & Research Nederlandse Algemene Keuringsdienst voor zaaizaad en pootgoed van landbouwgewassen

Exports